Decreased expression of the GABAA receptor in fragile X syndrome

1

Introduction

Fragile X syndrome is the most common form of inherited mental retardation, with a prevalence of 1 to 4000 in males and 1 to 6000 in females [reviewed by Bardoni et al. (2006) Gantois et al. (2004) O'Donnell and Warren (2002)]. Patients are characterized by mild to severe impairment of the higher cognitive functions and display various physical abnormalities, e.g., macroorchidism (enlarged testes) and craniofacial anomalies such as a typical long face, prominent jaws and elongated ears (Hagerman, 2002). Associated behavioral problems include hyperactivity and autistic-like features. In addition, 20% of the patients suffer from epileptic seizures. The syndrome is usually caused by a dynamic mutation of a CGG repeat in the 5′ untranslated region of the fragile X mental retardation gene 1 (FMR1) (Verkerk et al., 1991). Elongation of this repeat above a threshold of 200 copies induces hypermethylation of the CpG islands in the promoter region and concomitant transcriptional silencing, preventing synthesis of the FMR1 gene product FMRP (Pieretti et al., 1991).#

Add commentAdd assertion

FMRP is an RNA-binding protein with particular high expression in neurons and gonads. The protein aggregates with multiple mRNAs and proteins to form a messenger ribonucleic protein complex (mRNP), which is transported out of the nucleus through its nuclear export signal (Jin and Warren, 2003). Once in the cytoplasm, the complex can associate with members of the RNA-induced silencing complex (RISC) before associating with ribosomes. The FMRP–mRNP complex can be transported through dendrites to actively translating polyribosomes near the synapses, where it may play a role in local protein synthesis as a translational inhibitor (Laggerbauer et al. 2001; Li et al. 2001; Zalfa et al. 2003). Major mechanisms by which FMRP is thought to exert its repressing activity are through the RNA interference pathway or by acting as a nucleic acid chaperone (Bardoni et al. 2006; Gabus et al. 2004; Jin et al. 2004).#

Add commentAdd assertion

Interruption of the murine Fmr1 gene generated a mouse model for fragile X syndrome (Bakker et al., 1994). Fragile X knockout mice show mild cognitive deficits, hyperactivity, macroorchidism and increased sensitivity to epileptic seizures, features comparable with symptoms observed in fragile X patients (Bakker and Oostra 2003; Kooy 2003). Pathological studies revealed the presence of long tortuous, immature dendritic spines being denser along dendrites, as observed in patients (Braun and Segal 2000; Comery et al. 1997; Irwin et al. 2002; Nimchinski et al. 2001). FMRP may therefore affect synaptic development and maturation in the central nervous system. The invertebrate homologue of Fmr1 in fruit flies, namely ‘Drosophila melanogaster fragile X mental retardation gene 1’ (dFmr1), exhibits high neuronal expression levels. The associated gene product dFmrp displays considerable amino acid sequence identity/similarity with the vertebrate FMRP, especially within the functional domains. It possesses similar RNA-binding capacity as well as the ability to interact with human FMR1 (Wan et al., 2000). dFmr1 deficient fly models have been generated (Dockendorff et al. 2002; Michel et al. 2004; Morales et al. 2002; Zhang and Broadie 2005). dFmrp is required for normal neurite expansion, guidance and branching. Loss of dFmrp causes behavioral defects like abnormal eclosion and circadian rhythm behavior and anomalies in the morphology of several central nervous system neuronal populations.#

Add commentAdd assertion

Despite increased insights in the function of FMRP in the cell, the central question why absence of FMRP causes mental retardation and additional symptoms in fragile X patients remains to be elucidated. In a previous genome wide expression profiling study, our group found differential expression in neurons of specific brain parts from fragile X knockout mice limited to 3 cDNAs only, including the δ subunit of the GABAA receptor (Gantois et al., 2006). To further investigate a possible role of decreased expression of this ion channel in fragile X syndrome, we determined the relative expression of all GABAA receptor subunits in the mouse and fly model using real-time PCR. We found evidence that under expression of multiple subunits of the GABAA receptor is an evolutionary conserved hallmark of fragile X syndrome. As GABAA receptors are the main inhibitory receptors in brain, involved in processes also disturbed in fragile X patients such as anxiety, depression, epilepsy, insomnia and learning and memory (Mihalek et al., 1999), we believe that new powerful therapeutic opportunities for treatment of behavioral problems associated with fragile X syndrome might arise from these observations.#

Add commentAdd assertion
2

Results

2.1

Mus musculus

Cortical and cerebellar tissue of adult fragile X male mice and their control littermates was isolated and reverse transcribed as indicated in the experimental procedure. These regions were selected because in the initial genome wide study under expression of the δ subunit of the GABAA receptor was found in cortex but not in cerebellum. GABAA receptors display an extensive structural heterogeneity based on the differential assembly of a family of at least 18 different subunits (α1–6, β1–3, γ1–3, δ, ε, θ, π and ρ1–2) into distinct pentameric receptor complexes. Assays-on-demands® (ABI) were selected for every single known subunit of the GABAA receptor and for 3 reference genes (Gapdh, Hmbs and Hprt). Vandesompele et al. (2002) recommend the minimal use of 3 internal control genes to calculate the RT-PCR normalization factor to control for variables such as the amount of starting material, enzymatic efficiencies, and differences between tissues or cells in overall transcriptional activity. After performing the real-time PCR experiments, we calculated the coefficient of variance (CV) and the M-value for every single reference gene as described (Vandesompele et al., 2002) to analyze the stability of the internal control genes (Table 1). The measured values were amply within the norm.#

Add commentAdd assertion

For every subunit, we calculated the relative expression (RE), i.e. the ratio of the geometric means of the normalized expression values of the controls vs. the knockouts, e.g., RE (δ)= 58% means that the expression of the GABAA receptor δ subunit in cortex of knockout mice is only 58% of the expression seen in cortex of control littermates, which means a reduction of 42% (Table 2). This value corresponds to our initial observations where we found a significant reduction of 45% for the expression of the δ subunit in cortex but not in cerebellum (Gantois et al., 2006). In addition, 7 other subunits, namely α1, α3 and α4, β1 and β2 and γ1 and γ2, were significantly under expressed in the knockout mice. Differential expression was observed in cortex, but not in cerebellum (Table 2).#

Add commentAdd assertion
2.2

Drosophila melanogaster

Additionally, we measured the relative expression of the GABA receptor subunits in the D. melanogaster fragile X model (Morales et al., 2002). Ionotropic GABA receptors are found throughout the nervous system of various insect specious. To date, 3 receptor subunit classes have been cloned in D. melanogaster with a high sequence identity to vertebrate ionotropic GABA receptors, namely Rdl (resistant to dieldrin), Grd (GABA and glycine-like receptor of Drosophila) and Lcch3 (ligand-gated chloride channel homologue 3) (Hosie et al., 1997). Using real-time PCR, we compared the expression of Rdl, Grd and Lcch3 in wild-type strains with dFmr1−/− mutant fruit flies (Table 2). Because reference genes for use in real-time PCR experiments are not well documented in Drosophila, we tested the stability of 4 different reference genes: Dsh, Rpl32, TfIIb and Nadh. Based on the coefficients of variance and M-values (geNorm) (Vandesompele et al., 2002), we selected the two most stable genes Dsh and Rpl32 to normalize the real-time results (Table 1). Our results revealed significant reduction of 40%–50% in expression of all 3 subunits responsible for the assembly of the GABA receptor in dFmr1−/− mutants compared with the wild-type strain (Table 2).#

Add commentAdd assertion

To find out whether the expression of the GABA receptor subunits is directly regulated by FMRP, we additionally determined the expression levels in rescue strains containing 1 or 2 dFmr1 copies, randomly inserted in the genome of the dFmr1−/− null mutant. We observed a significant rise in the normalized RNA amount for Grd (1-way ANOVA, P=0.016) and Rdl (P=0.009) in function of the number of dFmr1 copies, which indicates a direct correlation between the expression of dFmrp and the amount of GABA receptor subunit mRNA in these two subunits (Fig. 1).#

Add commentAdd assertion
3

Discussion

Ionotropic receptors for the neurotransmitter γ-aminobutyric acid (GABA) are widespread mediators of rapid neurotransmission in the nervous systems of both vertebrates and invertebrates. In mammals, 30–50% of all synapses in the central nervous system are GABAergic (Paredes and Agmo, 1992). GABAA receptors mediate fast synaptic inhibition in brain and spinal cord because their associated channels are permeable to Cl ions; the flow of the negatively charged ions inhibits postsynaptic cells since the reversal potential for Cl is more negative than the threshold for neuronal firing. Like other types of ionotropic receptors, mammalian GABAA receptors are pentamers assembled from a combination of individual subunits from 8 families with multiple isoforms: α1–6, β1–4, γ1–4, δ, ε, θ, π and ρ1–2. The expression pattern of individual subunits generates a high diversity of GABAA receptor subtypes in a spatio-temporal dependent manner with a major functional and pharmacological diversity between GABAA receptor subtypes mutually (Barnard et al. 1998; Kneussel 2002; Korpi et al. 2002). GABAA receptors are modulated by many drugs, including ethanol, benzodiazepines, various anesthetics and neuroactive steroids.#

Add commentAdd assertion

D. melanogaster has a much simpler GABA receptor system, consisting of three genes only, namely Rdl (resistance to dieldrin), Grd (GABA and glycine-like receptor of Drosophila) and Lcch3 (ligand-gated chloride channel homologue 3) (Hosie et al., 1997). As in their vertebrate counterparts, the binding of GABA to the receptor causes a fast, temporary opening of anion-selective ion channels with an inhibitory response as a consequence. The subunits encoded by Rdl display 30%–38% homology with vertebrate GABA receptor subunits, about the same percentage of identity as seen between the different classes of vertebrate subunits (Ffrench-Constant et al., 1991). Grd displays 33–44% identity with vertebrate GABAA and glycine receptor α subunits (Harvey et al., 1994), and Lcch3 shows 47% identity with the vertebrate GABAA receptor β subunit isoforms (Henderson et al., 1993) (Fig. 2). Lcch3 can function as a subunit with Rdl in Cl channels (Zhang et al., 1995) and with Grd in cation channels (Gisselmann et al., 2004). It is the subunit composition which determines the picrotoxin and bicuculline sensitivity of the receptor.#

Add commentAdd assertion

Using real-time PCR, we found significant under expression of 8 out of 18 known subunits of the GABAA receptor, namely α1, α3 and α4, β1 and β2 and γ1 and γ2 and δ, in cortex of fragile X mice, a validated model for fragile X syndrome, compared to their control littermates. The under expression of the δ subunit is the most significant, thereby offering a possible explanation why only this subunit was picked up in our initial genome wide expression profiling study. Our results suggest under expression of both the most frequent subtype of the GABAA receptor, α1β2γ2, that makes up 60% of the GABAA receptors in brain and which is sensitive to benzodiazepines (e.g., Diazepam), and the δ-containing subtype of the GABAA receptor, α4βnδ, which is sensitive to neuroactive steroids such as alphaxalone, a synthetic analogue of allopregnanolone (a natural occurring metabolite of progesterone).#

Add commentAdd assertion

In addition, we found a nearly 50% reduction in expression of all 3 GABA receptor subunits, Grd, Rdl and Lcch3, in the fragile X fruit fly compared with wild-type strains, suggesting that under expression of specific subunits of the GABAA receptor is an evolutionary conserved hallmark of fragile X syndrome. Moreover, mRNA expression of subunits Rdl and Grd was shown to be dependent on the number of dFmr1 copies, indicating a direct correlation between the amount of dFmrp and the expression of the GABA receptor.#

Add commentAdd assertion

We can only speculate the cause of the under expression of the GABAA receptor subunits in the fragile X animal models. Miyashiro et al. (2003) demonstrated a direct binding between FMRP and the mRNA of the δ subunit of the GABAA receptor using the Antibody Positioned RNA Amplification (APRA) technique, suggesting a direct effect of FMRP on transport and/or localization of GABAA receptor subunits. As FMRP plays an important role in transport and translation of mRNA, it could be speculated that in the absence of FMRP RNAs, normally bound to FMRP, are misregulated and/or degraded.#

Add commentAdd assertion

Although we demonstrate under expression of various subunits at the mRNA level, results by others indicate that the protein level is also affected. Firstly, El Idrissi et al. (2005) have detected a reduced expression of the β subunit of the GABAA receptor on protein level in cortex, hippocampus, diencephalon and brainstem of fragile X mice using Western blot analysis. Nevertheless, additional protein expression studies are necessary to validate our results on protein level. Secondly, Gruss and Braun (2004) found that the ratio between inhibitory (taurine and GABA) and excitatory (aspartate and glutamate) amino acids in fragile X mouse brainstem, hippocampus and caudal cortex was decreased. Thirdly, electrophysiological recordings suggest a decreased GABAergic system efficiency in fragile X knock out mice that in turn may interfere with cholinergic mechanisms (D'Antuono et al., 2003). Moreover, preliminary results of our group predict mRNA under expression of glutamic acid decarboxylase (GAD), the limiting enzyme responsible for GABA synthesis in the presynaptic terminal of inhibiting synapses, in brain of fragile X mutant fruit flies (D'Hulst, Hassan and Kooy, unpublished results).#

Add commentAdd assertion

In conclusion, we present evidence that decreased expression of the GABAA receptor is an evolutionary conserved hallmark of fragile X syndrome. As GABAA receptors are involved in anxiety, depression, epilepsy, insomnia and learning and memory (Mihalek et al., 1999), processes also disturbed in patients (Table 3), we might have identified a new target for rational drug therapy of the behavioral abnormalities and epilepsy associated with fragile X syndrome.#

Add commentAdd assertion
4

Experimental procedure

4.1

Animal and tissue preparation

4.1.1

M. musculus

Male C57BL/6J wild-type mice, purchased from Charles River (Wilmington, MA, USA), were crossed with females heterozygous for the Fmr1 mutation and backcrossed for at least 20 generations in the same genetic background. After DNA isolation from mouse tails, genotypes were determined by polymerase chain reaction (PCR) as described (Bakker et al., 1994). Male Fmr1 knockout mice and male control littermates with an average age of 8–12weeks were used. Mixed genotype groups of approximately 5 littermates were housed in standard mouse cages under conventional laboratory conditions (food and water ad libitum, constant room temperature and humidity, 12:12h light–dark cycle). After cervical dislocation, the brain was immediately removed; frontal cortex and cerebellum were dissected and frozen in liquid nitrogen. All experiments were carried out in compliance to the European Communities Council Directive (86/609/EEC) and approved by the Animal Ethics Committee of the University of Antwerp.#

Add commentAdd assertion
4.1.2

D. melanogaster

White Canton-S flies were used as wild-type controls (lab stock). Fragile X deficient flies were selected from a stock of the genotype w;P{dfmr1}/+;dfmr13/TM6C,Tb,Sb (a kind gift from T. Jongens) allowing for the selection of dfmr13 mutants (0r) or dfmr13 mutants possessing 1 (1r) or 2 (2r) copies of a genomic rescue insertion (Dockendorff et al., 2002). Table 4 details the crossing scheme used to obtain the appropriate genotype. All mating schemes were performed on standard fly food at controlled ambient temperatures.#

Add commentAdd assertion
4.2

RNA

4.2.1

M. musculus

After homogenizing the different brain parts of 11 knockouts and 11 control littermates (with beads of 0.5mm in the Mini Beadbeater, Biospec products, Bartleville, OK, USA), total cellular RNA was isolated using Trizol (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's instructions. After RNase-free DNAse treatment (Ambion, Austin, TX, USA), RNA quality was tested using spectrophotometry with an optical density ratio 260/280 between 1.8 and 2 as requirement.#

Add commentAdd assertion
4.2.2

D. melanogaster

Total cellular RNA (per strain (wt, 0r, 1r and 2r) 10 pools of 20 fly heads) was isolated using Trizol (Invitrogen, Carlsbad, CA, USA) according to the manufacturer's instructions. After RNase-free DNAse treatment of the RNA samples, RNA quality was checked with the automated gel electrophoresis Experion system from Biorad (Hercules, CA, USA); 28S/18S ratios between 1 and 2 were used as requirement.#

Add commentAdd assertion
4.3

Real-time PCR (qPCR)

4.3.1

M. musculus

mRNA expression was examined by an optimized two-step real-time quantitative PCR assay (RT-PCR). In the reverse transcription step (RT), cDNA was reverse transcribed from total RNA samples using random hexamer primers from the SuperscriptIII First-strand synthesis system for RT-PCR (Invitrogen, Carlsbad, CA, USA). Genomic contamination of the generated cDNA was checked with 2 primers located in exons overspanning an intron. First strand cDNA was diluted in TE−4 buffer until a final maximum concentration of 120ng/μl. In the PCR step, PCR products were synthesized from cDNA samples using the qPCR MasterMix plus w/o UNG (Eurogentec, Seraing, Belgium). As detection method, we used Assays-on-demands (ABI, Foster City, CA, USA) containing a forward and a reverse primer, and a TaqMan MGB probe (6-FAM dye-labeled) built on Applied Biosystems 5′ nuclease chemistry and developed specifically for detection of the gene of interest (Table 5). In the majority of the cases, the probes crossed exon–exon junctions excluding the possibility of amplification of genomic DNA. The PCR mixtures were run on an ABI 7000 sequence detection system. The cycling conditions were as follows: 2min 50 °C, 10min 95 °C and 40 cycles at 95 °C for 15s and 60 °C for 1min. Per brain region, we compared 11 control samples with 11 knockouts. We maximized the number of samples and minimized the number of genes per run. Every 96 well plate contained a no template control and all the samples were spotted in duplex. The results of the Sequence Detection Software (Applied Biosystems) were exported as tab delimited files and imported into the relative quantification software qBase (Hellemans et al., in preparation; http://medgen.ugent.be/qbase/) for further analysis. This program performs a raw data quality control and calculates the normalized quantities of the genes of interest and reports the reference gene quality values (mean coefficient of variation of the normalized reference genes quantities and the geNorm stability value M, Table 1). Here the transcription levels were normalized by the geometric mean of 3 stably expressed reference genes (Gapdh, Hmbs and Hprt). A Mann–Whitney U non-parametrical test was used to check the statistical significance (p<0.05) of the obtained results (SPSS Inc., Version 12.0, Chicago, IL, USA).#

Add commentAdd assertion
4.3.2

D. melanogaster

Setup and analysis of the real-time experiments were analogous to those described for the mouse model. The transcription levels were normalized by the geometric mean of 2 stably expressed reference genes (Rpl32 and Dsh). Per strain (wt, 0r, 1r en 2r), we screened 10 independent cDNA samples. A Mann–Whitney U non-parametrical test was used to check the statistical significance (p<0.05) of the difference between wt and 0r. Additionally, we used a 1-way ANOVA to compare group differences between 0r, 1r and 2r (SPSS 12.0).#

Add commentAdd assertion

Acknowledgments

We thank Jo Vandesompele for his advice in analyzing the real-time PCR results and Philip Pattyn for his help with the RNA quality analysis. We thank Pierre Codde and Ivan Aerts for the animal care. This study was supported through grants of the National Fragile X Foundation (NFXF), the Institute for the Promotion of Innovation through Science and Technology in Flanders (IWT Vlaanderen), the Belgian National Fund for Scientific Research-Flanders (FWO) and the Fondation Jerôme Lejeune.#

Add commentAdd assertion

Figures and Tables

Fig. 1
Boxplots showing the significant rise in the normalized RNA amount for Grd and Rdl (and not Lcch3) in function of the number of copies of dFmr1 randomly inserted in the dFmr1−/− null mutant (rescue strains), which indicates a direct correlation between the amount of dFmrp and the expression of the GABA receptor subunits. The visible dots are outliers. 0r, 1r and 2r: fly strains containing respectively none (0r), 1 (1r) and 2 (2r) dFmr1 copies. The significance was tested using one-way ANOVA.
Add commentAdd assertion
Fig. 2
A dendrogram illustrating the relative similarity of the known insect GABA receptor subunits to those of other ligand-gated anion channels. The PILEUP algorithm (Genetics Computer Group, Madison, WI, USA) was used to group all the known isoforms of these subunits on the basis of similarity in their amino acid sequences. Vertebrate GABA receptor subunits are marked as α, β, etc., GLY refers to GlyR subunits while Glu Cl and Hc G1 refer to glutamate-gated chloride channels and a putative GABAR or GlyR subunits from Haemonchus contortus. Reprinted from Trends in Neurosciences, 20, Hosie et al., Molecular biology of insect neuronal GABA receptors, 578–583, Copyright (1997), with permission from Elsevier.
Add commentAdd assertion

Table 1

a

The coefficient of variance represents the variation of the normalized relative quantities of a reference gene across all samples. Ideally, the variation after normalization is nihil. Hence, lower CV values denote higher stability.

b

The M value is the gene expression stability as calculated by geNorm (qBase). The lower the M-value, the more stably expressed is the reference gene.
Coefficient of variance
Brain part
Mus musculus
Reference gene Cortex (C vs. KO) Cerebellum (C vs. KO)
CV (%)a M (geNorm)b CV (%) M (geNorm)
Gapdh 25.13 1.3093 21.01 0.5924
Hmbs 25.73 1.3120 19.00 0.5008
Hprt 26.70 0.6288 29.92 0.6828
Mean 25.85 1.0834 22.85 0.5920
Drosophila melanogaster
Reference gene 0r vs. wt 0r vs. 1r 0r vs. 2r
CV (%) M (geNorm) CV (%) M (geNorm) CV (%) M (geNorm)
Dsh 30.05 0.7554 20.96 0.5971 23.93 0.6834
Rpl32 23.12 0.7554 20.72 0.5971 23.83 0.6834
Mean 26.58 0.7554 20.84 0.5971 23.88 0.6834
0r, 1r and 2r: Fly strains containing respectively none (0r), 1 (1r) and 2 (2r) dFmr1 copies.

Table 2

a

Cortical subunit

b

Cerebellar subunit
Relative expression
Mus musculus
Subunit GABAAR Cortex Cerebellum
RE (KO) Significance RE (KO) Significance
α1 65% p<0.05 96% NS
α2 90% NS 97% NS
α3 58% p<0.01 97% NS
α4a 77% p<0.05 LE
α5 83% NS 104% NS
α6b LE 67% NS
β1 67% p<0.05 98% NS
β2 55% p<0.01 86% NS
β3 83% NS 104% NS
δ 58% p≪0.01 83% NS
γ1 64% p<0.01 92% NS
γ2 61% p<0.01 97% NS
γ3 87% NS 113% NS
π LE LE
ε LE LE
ρ1 LE LE
ρ2 LE LE
θ LE LE
Drosophila melanogaster
Subunit GABAR Wt vs. 0r
RE (dFmr1/ mutant) Significance
Grd 58% p<0.05
Rdl 60% p<0.01
Lcch3 51% p<0.01
NS: not significant, LE: expression too low to detect reliable differences between samples.The given percentages indicate the expression of the specific GABAA receptor subunits left in brain of respectively the mouse and fly model for fragile X syndrome. The subunits in bold are significantly under expressed.

Table 3

Fragile X symptoms that could be due to decreased expression of the GABAA receptor
Symptoms % of affected males References
Neurological abnormalities
Epileptic seizures 20–25% Musumeci et al., 2000
Deviant EEG
–Medium to high-voltage unilateral or bilateral spikes in the temporal lobe 58% Musumeci et al., 1999
–Rolandic spikes 17% Musumeci et al., 1999
Sleeping problems NA Gould et al., 2000
Behavioral problems
Autistic features 60–92.5% Hagerman, 2002
Hyperactivity 67% Hagerman, 2002
Anxiety 73.5% Hagerman, 2002
NA: not available.

Table 4

Crossing scheme Drosophila melanogaster
wt/rescue;dFmr1/TM6 X wt/rescue;dFmr1/TM6
Frequency Genotype Code Phenotype
1/3 rescue/wt; dFmr1/TM6 Short bristles
1/6 rescue/rescue; dFmr1/TM6 Short bristles
1/6 rescue/wt; dFmr1/dFmr1 1r Long, normal bristles, orange eyes
1/12 rescue/rescue; dFmr1/dFmr1 2r Long, normal bristles, red eyes
1/12 wt/wt; dFmr1/dFmr1 0r Long, normal bristles, white eyes
1/6 wt/wt; dFmr1/TM6 Short bristles
The rescue allele and the dFmr1−/− allele both are located on the 2nd chromosome. TM6 is a balancer chromosome that makes it possible to determine the genotype by looking at the phenotype. In this crossing the wild-type strain is not available; TM6/TM6 is lethal.

Table 5

Assays real-time PCR
Gene Assay ID
M. musculus
Reference genes
Hprt Mm00446968_m1
Gapdh Mm99999915_g1
Hmbs Mm006660261_g1
Subunits of GABAA R
δ Mm00433476_m1
α1 Mm00439040_m1
α2 Mm00433435_m1
α3 Mm00433440_m1
α4 Mm00802631_m1
α5 Mm00621092_m1
α6 Mm00433456_m1
β1 Mm00433461_m1
β2 Mm00433467_m1
β3 Mm00433473_m1
ε Mm00489932_m1
γ1 Mm00439047_m1
γ2 Mm00433489_m1
γ3 Mm00433494_m1
θ Mm00445057_m1
ρ1 Mm00433499_m1
ρ2 Mm00433507_m1
π Mm00524604_m1
D. melanogaster
Reference genes
Dsh Dm02371846_s1
Rpl32 Dm02151827_g1
Subunits of GABAR
Rdl Dm01822422_m1
Grd Dm01823018_m1
Lcch3 Dm01799500_g1

References

1. C.E.BakkerB.A.OostraUnderstanding fragile X syndrome: insights from animal modelsCytogenet. Genome Res.1002003111123

Add commentAdd assertion

2. C.E.BakkerC.VerheijR.WillemsenR.van der HelmF.OerlemansM.VermeyA.BygraveA.T.HoogeveenB.A.OostraE.ReyniersK.De BoulleR.D'HoogeP.CrasD.van VelzenG.NagelsJ.-J.MartinP.P.De DeynJ.K.DarbyP.J.WillemsFmr1 knockout mice: a model to study fragile X mental retardationCell7819942333

Add commentAdd assertion

3. B.BardoniL.DavidovicM.BensaidE.W.KhandjianThe fragile X syndrome: exploring its molecular basis and seeking a treatmentExpert Rev. Mol. Med.82006116

Add commentAdd assertion

4. E.A.BarnardP.SkolnickR.W.OlsenH.MohlerW.SieghartG.BiggioC.BraestrupA.N.BatesonS.Z.LangerInternational Union of Pharmacology. XV. Subtypes of γ-aminobutyric acidA receptors: classification on the basis of subunit structure and receptor functionPharmacol. Rev.501998291313

Add commentAdd assertion

5. K.BraunM.SegalFMRP involvement in formation of synapses among cultured hippocampal neuronsCereb. Cortex10200010451052

Add commentAdd assertion

6. T.A.ComeryJ.B.HarrisP.J.WillemsB.A.OostraS.A.IrwinI.J.WeilerW.T.GreenoughAbnormal dendritic spines in fragile X knockout mice: maturation and pruning deficitsProc. Natl. Acad. Sci. U. S. A.94199754015404

Add commentAdd assertion

7. M.D'AntuonoD.MerloM.AvoliInvolvement of cholinergic and GABAergic systems in the fragile X knockout miceNeuroscience1192003913

Add commentAdd assertion

8. T.C.DockendorffH.S.SuS.M.McBrideZ.YangC.H.ChoiK.K.SiwickiA.SehgalT.A.JongensDrosophila lacking dfmr1 activity show defects in circadian output and fail to maintain courtship interestNeuron342002973984

Add commentAdd assertion

9. A.El IdrissiX.-H.DingJ.ScaliaE.TrenknerW.T.BrownC.DobkinDecreased GABAA receptor expression in the seizure-prone fragile X mouseNeurosci. Lett.3772005141146

Add commentAdd assertion

10. R.H.Ffrench-ConstantD.P.MortlockC.D.ShafferR.J.MacIntyreR.T.RoushMolecular cloning and transformation of cyclodiene resistance in Drosophila: an invertebrate gamma-aminobutyric acid subtype A receptor locusProc. Natl. Acad. Sci. U. S. A.88199172097213

Add commentAdd assertion

11. C.GabusR.MazrouiS.TremblayE.W.KhandjianJ.-L.DarlixThe fragile X mental retardation protein has nucleic acid chaperone propertiesNucleic Acids Res.32200421292137

Add commentAdd assertion

12. I.GantoisR.F.KooyB.A.OostraInsights in fragile X syndromeR.A.MeyersEncyclopedia of Molecular Cell Biology and Molecular Medicine2004Wiley-VCHWeinheim, Germany585631

Add commentAdd assertion

13. I.GantoisJ.VandesompeleF.SpelemanE.ReyniersR.D'HoogeL.-A.SeverijnenR.WillemsenF.TassoneR.F.KooyExpression profiling reveals involvement of the GABAA receptor subunit delta in the fragile X syndromeNeurobiol. Dis.212006346357

Add commentAdd assertion

14. G.GisselmannJ.PlonkaH.PuschH.HattDrosophila melanogaster GRD and LCCH3 subunits form heteromultimeric GABA-gated cation channelsBr. J. Pharmacol.1422004409413

Add commentAdd assertion

42. E.L.GouldD.Z.LoeschM.J.MartinR.J.HagermanS.M.ArmstrongR.M.HugginsMelatonin profiles and sleep characteristics in boys with fragile X syndrome: a preliminary studyAm. J. Med. Genet.952000307315

Add commentAdd assertion

15. M.GrussK.BraunAge- and region-specific imbalances of basal amino acids and monoamine metabolism in limbic regions of female Fmr1 knock-out miceNeurochem. Int.4520048188

Add commentAdd assertion

16. R.J.HagermanPhysical and behavioral phenotypeR.J.HagermanP.J.HagermanFragile X Syndrome: Diagnosis, Treatment and Research2002Johns Hopkins University PressBaltimore, MA3109

Add commentAdd assertion

17. R.J.HarveyB.SchmittI.Hermans-BorgmeyerE.D.GundelfingerH.BetzM.G.DarlisonSequence of a Drosophila ligand-gated ion-channel polypeptide with an unusual amino-terminal extracellular domainJ. Neurochem.62199424802483

Add commentAdd assertion

18. J.E.HendersonD.M.SoderlundD.C.KnippleCharacterization of a putative gamma-aminobutyric acid (GABA) receptor beta subunit gene from Drosophila melanogasterBiochem. Biophys. Res. Commun.1931993474482

Add commentAdd assertion

19. A.M.HosieK.AronsteinD.B.SattelleR.H.ffrench-ConstantMolecular biology of insect neuronal GABA receptorsTrends Neurosci.201997578583

Add commentAdd assertion

20. S.A.IrwinM.IdupulapatiM.E.GilbertJ.B.HarrisA.B.ChakravartiE.J.RogersR.A.CrisostomoB.P.LarsenA.MethaC.J.AlcantaraB.PateR.SwainI.J.WeilerB.A.OostraW.T.GreenoughDendritic spine and dendritic field characteristics of layer V pyramidal neurons in the visual cortex of fragile-X knockout miceAm. J. Med. Genet.1112002140146

Add commentAdd assertion

21. P.JinS.T.WarrenNew insights into fragile X syndrome: from molecules to neurobehaviorsTrends Biochem. Sci.282003152158

Add commentAdd assertion

22. P.JinR.S.AlischS.T.WarrenRNA and microRNAs in fragile X mental retardationNat. Cell Biol.6200410481053

Add commentAdd assertion

23. M.KneusselDynamic regulation of GABAA receptors at synaptic sitesBrain Res. Rev.3920027483

Add commentAdd assertion

24. R.F.KooyOf mice and the fragile X syndromeTrends Genet.192003148154

Add commentAdd assertion

25. E.R.KorpiG.GrunderH.LuddensDrug interactions at GABA(A) receptorsProg. Neurobiol.672002113159

Add commentAdd assertion

26. B.LaggerbauerD.OstareckE.M.KeidelA.Ostareck-LedererU.FischerEvidence that fragile X mental retardation protein is a negative regulator of translationHum. Mol. Genet.102001329338

Add commentAdd assertion

27. Z.LiY.ZhangL.KuK.D.WilkinsonS.T.WarrenY.FengThe fragile X mental retardation protein inhibits translation via interacting with mRNANucleic Acids Res.29200122762283

Add commentAdd assertion

28. C.I.MichelR.KraftL.L.RestifoDefective neuronal development in the mushroom bodies of Drosophila fragile X mental retardation 1 mutantsJ. Neurosci.24200457985809

Add commentAdd assertion

29. R.M.MihalekP.K.BanerjeeE.R.KorpiJ.J.QuinlanL.L.FirestoneZ.-P.MiC.LagenaurV.TretterW.SieghartS.G.AnagnostarasJ.R.SageM.S.FanselowA.GuidottiI.SpigelmanZ.LiT.M.DeLoreyR.W.OlsenG.E.HomanicsAttenuated sensitivity to neuroactive steroids in γ-aminobutyrate type A receptor delta subunit knockout miceProc. Natl. Acad. Sci. U. S. A.9619991290512910

Add commentAdd assertion

30. K.Y.MiyashiroA.Beckel-MitchenerT.P.PurkK.G.BeckerT.BarretL.LiuS.CarbonettoI.J.WeilerW.T.GreenoughJ.EberwineRNA cargoes associating with FMRP reveal deficits in cellular functioning in Fmr1 null miceNeuron372003417431

Add commentAdd assertion

31. J.MoralesP.R.HiesingerA.J.SchroederK.KumeP.VerstrekenF.R.JacksonD.L.NelsonB.A.HassanDrosophila fragile X protein. DFXR, regulates neuronal morphology and function in the brainNeuron342002961972

Add commentAdd assertion

43. S.A.MusumeciR.J.HagermanR.FerriP.BoscoB.Dalla BernardinaC.A.TassinariG.B.De SarroM.EliaEpilepsy and EEG findings in males with fragile X syndromeEpilepsia40199910921099

Add commentAdd assertion

44. S.A.MusumeciP.BoscoG.CalabreseC.BakkerG.B.De SarroM.EliaR.FerriB.A.OostraAudiogenic seizures susceptibility in transgenic mice with fragile X syndromeEpilepsia4120001923

Add commentAdd assertion

32. E.A.NimchinskiA.M.OberlanderK.SvobodaAbnormal development of dendritic spines in FMR1 knock-out miceJ. Neurosci.21200151395146

Add commentAdd assertion

33. W.T.O'DonnellS.T.WarrenA decade of molecular studies of fragile X syndromeAnnu. Rev. Neurosci.252002315338

Add commentAdd assertion

34. R.G.ParedesA.AgmoGABA and behavior: the role of receptor subtypesNeurosci. Biobehav. Rev.161992145170

Add commentAdd assertion

35. M.PierettiF.ZhangY.-H.FuS.T.WarrenB.A.OostraC.T.CaskeyD.L.NelsonAbsence of expression of the FMR-1 gene in fragile X syndromeCell661991817822

Add commentAdd assertion

36. J.VandesompeleK.De PreterF.PattynB.PoppeN.Van RoyA.De PaepeF.SpelemanAccurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesGenome Biol.3200234.1234.31

Add commentAdd assertion

37. J.M.H.A.VerkerkM.PierettiJ.S.SutcliffeY.-H.FuD.P.A.KuhlA.PizzutiO.ReinerS.RichardsM.F.VictoriaF.ZhangB.E.EussenG.-J.B.van OmmenL.A.J.BlondenG.J.RigginsJ.L.ChastainC.B.KunstH.GaljaardC.T.CaskeyD.L.NelsonB.A.OostraS.T.WarrenIdentification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndromeCell651991905914

Add commentAdd assertion

38. L.WanT.C.DockendorffT.A.JongensG.DreyfussCharacterization of dFMR1, a Drosophila melanogaster homolog of the fragile X mental retardation proteinMol. Cell. Biol.20200085368547

Add commentAdd assertion

39. F.ZalfaM.GiorgiB.PrimeranoA.MoroA.Di PentaS.ReisB.OostraC.BagniThe fragile X syndrome protein FMRP associates with BC1 RNA and regulates the translation of specific mRNAs at synapsesCell1122003317327

Add commentAdd assertion

40. Y.Q.ZhangK.BroadieFathoming fragile X in fruit fliesTrends Genet.2120053745

Add commentAdd assertion

41. H.G.ZhangH.J.LeeT.RocheleauR.H.Ffrench-ConstantM.B.JacksonSubunit composition determines picrotoxin and bicuculline sensitivity of Drosophila gamma-aminobutyric acid receptorsMol. Pharmacol.481995835840

Add commentAdd assertion
Display comments
About this application
Developed by 67 Bricks Ltd.