Brain-derived neurotrophic factor rapidly increases NMDA receptor channel activity through Fyn-mediated phosphorylation
Introduction
In addition to playing roles in trophic function, BDNF acutely modulates synaptic transmission and regulates long-term potentiation (LTP) (Figurov et al. 1996; Akaneya et al. 1997; Tyler et al. 2002; Lu 2003; Pang and Lu 2004) and depression (Akaneya et al. 1996; Huber et al. 1998; Kinoshita et al. 1999), models of learning and memory. However, the molecular events that mediate BDNF actions at the synaptic level remain largely elusive. It is well accepted that facilitation of transmitter release is a major mechanism underlying BDNF enhancement of rapid synaptic transmission (Schinder and Poo 2000; Poo 2001). BDNF has also been demonstrated to exert rapid effects by modulating postsynaptic ion channels (Black 1999; Schinder and Poo 2000; Manabe 2002; Rose et al. 2004). Moreover, BDNF modulates the activity of NMDA receptors (Levine et al., 1998) that play key roles in distinctive synaptic processes, such as transmission and LTP.#
NMDA receptors consist of the NR1 subunit and at least one type of NR2A–2D or NR3 subunits (Moriyoshi et al. 1991; Monyer et al. 1992; Ishii et al. 1993; Chatterton et al. 2002). Our previous studies revealed that BDNF rapidly and transiently enhanced tyrosine phosphorylation of the NMDA receptor subunits NR1 (Suen et al., 1997) and NR2B but not NR2A (Lin et al., 1998) in cerebrocortical and hippocampal postsynaptic densities (PSDs), functionally critical subcellular organelles apposed to the inner surface of postsynaptic membranes of chemical synapses (Siekevitz, 1985). Our observations provide a potential mechanism for BDNF modulation of synaptic plasticity. Of particular relevance, BDNF increases NMDA receptor activity in an NR2B-dependent manner (Crozier et al., 1999). Phosphorylation of NR2B subunits plays a critical role in modulation of NMDA receptor functions. For example, tyrosine phosphorylation of NR2B is increased after induction of LTP (Rosenblum et al. 1996; Rostas et al. 1996) and appears to be involved in taste learning in the insular cortex (Rosenblum et al., 1997). Furthermore, suppression of NR2B phosphorylation by lithium reportedly leads to inactivation of NMDA receptors and resultant reduced excitotoxicity (Hashimoto et al., 2002). These observations raise the possibility that BDNF modulates NMDA receptor activity through tyrosine phosphorylation of NR2B.#
Of note, the long intracellular C-terminal tail of NR2B (Kutsuwada et al. 1992; Meguro et al. 1992; Monyer et al. 1992) is a functionally important region targeted by numerous protein kinases (Sheng 1996; Mori et al. 1998; Sprengel et al. 1998). Indeed, LTP increases phosphorylation of tyrosine residue 1472 at the C terminus catalyzed by Fyn, a tyrosine kinase that plays a critical role in LTP (Nakazawa et al., 2001). Moreover, Fyn reportedly coimmunoprecipitates with trkB and NR2B (Mizuno et al., 2003). Consequently, BDNF might modulate plasticity via Fyn-mediated phosphorylation of Tyr1472-NR2B.#
In the present study, we investigated BDNF actions on Tyr1472-NR2B phosphorylation in the PSD and delineated the mediating signaling pathways. We employed PSD preparations to define the postsynaptic actions of BDNF. Moreover, we began exploring functions of phosphorylation through patch clamp recording of BDNF actions on single NMDA receptor channel activity in Fyn knockout hippocampal neurons. The electrophysiology was performed in hippocampal neurons because of the extensive amount of data already available from these neurons.#
Results
BDNF regulates Tyr1472-NR2B phosphorylation in a dose- and time-dependent manner
To begin examining whether BDNF regulates Tyr1472-NR2B phosphorylation, we exposed cerebrocortical PSDs to varying concentrations of BDNF for 10 min. BDNF (2–25 ng/ml) elicited an increase in Tyr1472-NR2B phosphorylation (Fig. 1A), using equivalent concentrations of NR2B protein (Fig. 1B). BDNF evoked a maximal, 1.8-fold enhancement of phosphorylation per unit protein at 2 ng/ml of BDNF within 10 min (Fig. 1C). Higher doses of BDNF had lesser effects: 5 ng/ml of BDNF increased phosphorylation 1.5-fold, while 10 ng/ml and 25 ng/ml of BDNF only increased phosphorylation 1.3-fold.#
To define the acute effects of BDNF, we studied the time course of BDNF action on Tyr1472 phosphorylation (Figs. 1D–F). Incubation with 2 ng/ml BDNF increased phosphorylation 1.4-fold after 5 min. Incubation for 10 min elicited a maximal, 1.8-fold enhancement of phosphorylation. Incubation with BDNF for 30 min, however, had a much lesser effect. Decrease in phosphorylation with longer incubation was apparently the result of dephosphorylation since there was no change in NR2B protein level during the incubation (Fig. 1D).#
Specificity of BDNF
To determine whether other trophins also regulate Tyr1472-NR2B phosphorylation, we examined NGF and NT-3 (Figs. 2A–C). BDNF increased phosphorylation 1.8-fold, while neither NGF nor NT-3 had effects, indicating that phosphorylation was specifically and selectively modulated by BDNF.#
To determine whether BDNF regulates Tyr1472 phosphorylation through activation of trkB, we examined K252a, a trk tyrosine kinase inhibitor (Berg et al. 1992; Knusel et al. 1992; Knusel and Hefti 1992; Nye et al. 1992; Tapley et al. 1992). BDNF increased phosphorylation 1.8-fold (Figs. 2D–F). Pretreatment with K252a alone had no effects on phosphorylation, but dramatically blocked BDNF-activated phosphorylation (Figs. 2D–F).#
ERK1 or PI-3K inhibitors block Tyr1472 phosphorylation
To define signaling pathways involved in BDNF-mediated Tyr1472 phosphorylation, we initially focused on ERK1 and PI-3K, which reportedly mediate BDNF synaptic actions (Gottschalk et al., 1999). Two pharmacological inhibitors of each effector were used (PD98059 and U0126 for ERK1, and wortmannin and LY294002 for PI-3K). PD98059 (PD, 100 μM) alone had no effect on phosphorylation, but prevented the BDNF enhancement of phosphorylation (Figs. 3A–C). Two concentrations (25 μM or 40 μM) were used for U0126, another inhibitor to ERK1. At either concentration, U0126 itself did not change phosphorylation; however, the BDNF effect on phosphorylation was blocked after preincubation with U0126.#
The PI-3K inhibitor wortmannin was also examined at different concentrations. Wortmannin [0.1 μM (W1) or 1 μM (W2)] alone did not alter phosphorylation (Figs. 3B and C), but blocked BDNF-mediated enhancement. LY294002 (LY, 50 μM), another PI-3K inhibitor, also failed to alter phosphorylation when applied alone, but prevented the BDNF effect.#
BDNF-induced Tyr1472 phosphorylation is mediated by Fyn
To investigate the specific enzyme regulating BDNF-induced phosphorylation, we began with Fyn, a tyrosine kinase that regulates Tyr1472 phosphorylation and LTP (Nakazawa et al., 2001). Because tyrosine phosphorylation of Fyn increases its catalytic activity, we initially determined whether BDNF regulates phosphorylation of the kinase itself. BDNF (2 ng/ml), after 10 min of exposure, elicited a 2.8-fold increase (Figs. 4A–C). PP2 (1 μM), a specific inhibitor of Fyn, decreased phosphorylation (66.3±3.5% of baseline) and also abolished the BDNF-mediated enhancement.#
To determine whether Fyn is required for BDNF-mediated phosphorylation of NR2B, we selectively inhibited the enzyme. The results are presented in Figs. 4D–F. PP2 (1 μM) alone had no effects on phosphorylation. However, PP2 preincubation prevented BDNF-mediated enhancement. PP3 (1 μM), an inactivated form of PP2, had no effect either on baseline phosphorylation or on BDNF-mediated enhancement, suggesting the specificity of PP2 actions.#
BDNF-mediated Tyr1472 phosphorylation is impaired in Fyn knockout mice
To further define the role of Fyn, we examined cortical PSDs isolated from Fyn knockout mice. BDNF increased phosphorylation in PSDs from wild-type mice (WT) 1.9-fold (Fig. 5C). In Fyn knockout (Fyn−/−) PSDs, basal phosphorylation was decreased to only 20% of wild-type control (Fig. 5D). Moreover, in the presence of BDNF, no enhancement of phosphorylation (Fig. 5C) was observed in Fyn knockout mice, which remained at 20% (Fig. 5D) of wild-type controls, suggesting that Fyn regulates the phosphorylation.#
To confirm that Fyn mediates the phosphorylation, we examined exogenously applied, catalytically active Fyn. In PSDs from Fyn knockout mice, basal Tyr1472 phosphorylation was decreased and BDNF had no effect on phosphorylation (Figs. 5C and D). However, addition of active Fyn (20 ng/ml) dramatically enhanced phosphorylation by approximately 40-fold (Figs. 5G). In addition, BDNF did not further alter phosphorylation in the presence of active Fyn in Fyn knockout PSDs.#
BDNF regulates Tyr1472-NR2B phosphorylation in hippocampal neurons
To determine whether BDNF regulates phosphorylation of Tyr1472 in intact cells as in the PSD preparations, we investigated effects of the trophin in dissociated hippocampal neurons. Cells were dissected from day 16 wild-type mouse embryos and cultured in vivo for 10–14 days. Incubation with 20 ng/ml of BDNF for 10 min increased phosphorylation 2.5-fold (Figs. 6A–C), reproducing effects on cerebrocortical PSD preparations.#
Fyn is required for BDNF-mediated enhancement of single-channel activity
To begin defining the role of BDNF-mediated Tyr1472 phosphorylation in synaptic plasticity, we examined NMDA receptor activity in Fyn knockout animals in which phosphorylation was blocked. Using cell-attached single-channel recordings made from hippocampal neurons obtained from wild-type mice, we found that application of BDNF rapidly increased the charge through NMDA receptor channels 2-fold after 10–15 min of exposure (Figs. 7A and C). In contrast, NMDA receptors in neurons obtained from knockout mice did not display any increase in channel charge in response to BDNF (Figs. 7B and D). Moreover, NMDA receptor charges were significantly different for wild-type cells and Fyn knockout cells (Fig. 7E).#
Discussion
In the present study, we examined a potential postsynaptic mechanism by which BDNF rapidly augments synaptic transmission in the hippocampus (Levine et al. 1995 1996 1998; Alder et al. 2005; Kolb et al. 2005), focusing on BDNF-mediated phosphorylation in cortical PSDs as well as BDNF-enhanced NMDA receptor activity in dissociated hippocampal neurons.#
BDNF regulation of Tyr1472 phosphorylation
It is known that BDNF increases NMDA single-channel open probability via postsynaptic trkB receptors and that this effect is dependent on the presence of NR2B-containing receptors (Crozier et al. 1999; Levine and Kolb 2000); our results indicate that phosphorylation of Tyr1472 may play a critical role. This residue in the cortical NR2B is phosphorylated within 10 min of BDNF exposure. The rapid response correlates well with electrophysiological studies indicating that BDNF acutely enhances synaptic transmission in hippocampal neurons (Levine et al., 1995). The effects of BDNF on phosphorylation were rapid and transient, suggesting that both protein kinase(s) and phosphatase(s) participate. The enhancement of phosphorylation was maximal at 2 ng/ml of BDNF, a low concentration that implies the involvement of trkB, the high-affinity receptor for BDNF. K252a, an inhibitor of trk receptor tyrosine kinase, blocked BDNF enhancement of phosphorylation, confirming trkB mediation. In contrast to BDNF, NGF or NT-3 failed to regulate phosphorylation, in agreement with the findings that neither NGF nor NT-3 modulates synaptic transmission (Levine et al., 1996).#
We have also begun to identify the precise molecular signaling cascades leading to BDNF-mediated Tyr1472 phosphorylation. Trk autophosphorylation triggers activation of several downstream signaling molecules, including PI-3K, ERK1 and PLC-γ1. We focused on PI-3K and ERK1 as these signaling molecules are rapidly activated after application of BDNF to neonatal hippocampal slices (Gottschalk et al., 1999), and activation of these signaling pathways is involved in BDNF-dependent learning and memory (Yamada and Nabeshima, 2003). BDNF greatly attenuated synaptic fatigue at CA1 synapses induced by a train of high-frequency, tetanic stimulation (HFS), while the activation of MAPK and PI-3K is required for this BDNF action at presynaptic sites (Gottschalk et al., 1999). Our results suggest involvement of both PI-3K and ERK1 in BDNF-induced Tyr1472 phosphorylation in the PSD. Consequently, these signaling molecules apparently mediate BDNF fast actions at both pre- and postsynaptic sites, indicating multiple mechanisms of BDNF-induced synaptic transmission.#
Roles of Fyn in BDNF-mediated Tyr1472 phosphorylation
We employed two approaches to define the requirement of Fyn for BDNF-mediated effects. Biochemical studies using PSD preparations revealed that, within 10 min of exposure, BDNF enhanced phosphorylation of Fyn 2.8-fold, potentially leading to increased activity and Tyr1472 phosphorylation. PP2, a specific tyrosine kinase inhibitor of Fyn, blocked phosphorylation of both Fyn and Tyr1472. Although PP2 is also a potent inhibitor of p56c-src and HcK (Hanke et al., 1996), these kinases are not present in the PSDs (Wu et al., unpublished results), ruling out their participation in Tyr1472 phosphorylation. In PSDs isolated from Fyn-deficient mice, BDNF effects were abolished, confirming the involvement of Fyn in BDNF-mediated phosphorylation. Of note, the basal Tyr1472 phosphorylation in Fyn-deficient PSDs was only 20% of that in the wild-type PSDs. The simplest explanation for this finding is that Fyn is the major PSD kinase mediating up to 80% of Tyr1472 phosphorylation; presumably, other kinase(s) regulate the remaining 20%. In addition, exogenously applied active Fyn alone restored Tyr1472 phosphorylation to 800% over controls. BDNF did not exhibit any additional enhancement of phosphorylation because the exogenous Fyn employed was already active. Of note, BDNF alone increased Tyr1472 phosphorylation in the wild-type PSD roughly 2-fold, instead of the 40-fold exerted by Fyn in the knockouts (equal to 8-fold of the wild-type baseline). BDNF may activate only some of the Fyn pools in the PSD. The above results, showing the loss of BDNF Tyr1472 phosphorylation in Fyn knockout mice and the restoration of the phosphorylation by exogenously added active Fyn, suggest that Fyn is the downstream kinase phosphorylating Tyr1472-NR2B. It is well established that the primary effector molecules, such as ERK1 and PI-3K, transduce trk activation and initiate the subsequent reactions, leading to the phosphorylation of receptors by the specific kinases, e.g. Fyn in the present studies. As BDNF activates the primary proteins ERK1 and PI-3K (Wu et al., 1999), as well as the downstream kinase Fyn (present studies), activation of these primary molecules by BDNF ultimately leads to Fyn activation and the subsequent Tyr1472 phosphorylation. Taken together, our observations support the findings of Mizuno et al. (2003), showing that Fyn is a crucial mediator of signal transduction from trkB to NR2B.#
In the present studies, we examined the functionally critical PSDs instead of hippocampal neurons to emphasize the postsynaptic mechanisms of trkB-mediated ERK1 and PI-3K signaling cascades. We believe that our findings are real for the following reasons. First, the isolated PSDs are functionally intact structures. Isolation of PSDs does not lead to the aggregation of signaling components that normally do not exist together. For example, using immunocytochemistry, our previous findings revealed the localization of trkB and BDNF to PSDs in situ (Aoki et al., 2000). In addition, trkB activation in the isolated PSDs leads to activation of the primary effector molecules PI-3K, PLC-γ1, SHC and ERK1, but not SOS (Wu et al., 1999), potentially regulating BDNF-mediated postsynaptic receptor phosphorylation. Second, we have previously demonstrated that BDNF acutely enhanced phosphorylation of the NMDA receptor subunits NR1 in the isolated PSDs and synaptoneurosomes (intact synaptic apparatus from which PSDs were derived) (Suen et al., 1997) and NR2B (Lin et al., 1998) in the isolated PSDs. In particular, BDNF elicited a 2-fold increase in NR2B tyrosine phosphorylation, mimicking the effects of LTP (Rosenblum et al. 1996; Rostas et al. 1996). Subsequently, we discovered that BDNF acutely increased tyrosine phosphorylation of the AMPA receptor subunit GluR1 in the isolated PSDs via activation of the NMDA receptors (Wu et al., 2004). Third, our present studies demonstrated that BDNF evoked similar increase in Tyr1472-NR2B phosphorylation in both the isolated PSDs and cultured hippocampal neurons. Together, our studies indicate that the isolated PSDs contain intact machinery for BDNF signaling cascades, ruling out the possibility of artifactual results.#
Role of Fyn in BDNF-enhanced NMDA receptor activity
We conducted electrophysiological studies using hippocampal neurons to investigate the role of BDNF-mediated Tyr1472 phosphorylation in modulation of the NMDA receptor activity. Specifically, we used Fyn knockout mice because Fyn appears to be required for BDNF-mediated phosphorylation. Fyn-deficient mice are viable and fertile but display neurological defects including blunted LTP, impaired spatial learning and altered hippocampal development (Grant et al., 1992). Consequently, Fyn is apparently necessary for certain forms of synaptic plasticity. Our results revealed that basal activity of the NMDA receptor in Fyn knockout neurons was similar to that in wild-type neurons. Nevertheless, lack of Fyn impaired BDNF-mediated enhancement of channel activity, indicating that Fyn-mediated phosphorylation may be required for BDNF-mediated synaptic plasticity.#
BDNF is known to regulate LTP. Since NMDA receptors are critical for the induction of some forms of LTP, BDNF-induced modulation of NMDA receptors may influence the threshold for eliciting LTP. Furthermore, interaction between BDNF/TrkB signaling and NMDA receptors appears to be important in spatial memory (Mizuno et al., 2003). In addition, continuous intracerebroventricular infusion of PP2 in rats delayed memory acquisition, which is accompanied by diminished phosphorylation of Fyn and NR2B, but not trkB. These observations indicate the importance of Fyn-mediated modulation of NMDA receptor activity in BDNF-induced synaptic plasticity, correlating well with our findings.#
Using expression in heterologous cells, Kohr and Seeburg (1996) reported that NR2A, but not NR2B, containing receptors are affected by Fyn. Nonetheless, we believe that our results are real for the following reasons. First, the Kohr and Seeburg findings were obtained with recombinant channels expressed in heterologous system, whereas our findings were obtained with native channel in primary neurons. The signaling pathways in these two quite different systems may not be the same. Second, our primary goal was to examine elements of BDNF-induced changes in NMDA receptor activity, and we have a clear demonstration of Fyn involvement. It is apparently working through the NR2B subunit because the NR2A subunit is not phosphorylated in response to BDNF treatment (Lin et al., 1998). Third, another indicator that the effect is mediated by the NR2B subunit is that we are recording the activity of extrasynaptic NMDA receptors which are thought to be NR1-NR2B diheteromers that do not contain the NR2A subunit.#
Potential roles of BDNF-mediated Tyr1472 phosphorylation
The exact functions of BDNF-mediated Fyn-dependent Tyr1472-NR2B phosphorylation remain to be determined. Nonetheless, we propose that the phosphorylation may play significant roles in various synaptic processes. For example, BDNF-mediated Tyr1472 phosphorylation may alter the conformation of the NR2B subunits, leading to altered NMDA receptor conductivity and channel activity. In addition, protein tyrosine phosphorylation reportedly regulates protein–protein interactions (Pawson and Scott, 1997). NR2B is associated with a variety of proteins in the NMDA receptor complex through the C-terminal tail (Sheng, 1996), a region that binds to the functionally critical PDZ domain of PSD-95 (Kornau et al., 1995). Consequently, BDNF-mediated Tyr1472 phosphorylation in this domain may alter protein interactions of signaling molecules (Pawson and Scott, 1997), resulting in modulation of synaptic transmission and synaptic plasticity. Moreover, it has been shown that tyrosine phosphorylation of acetylcholine receptors at neuromuscular junctions increases clustering of the receptors (Wallace et al., 1991). As the C-terminal tail of NR2B is important in synaptic localization and clustering of the receptor (Mori et al., 1998), BDNF-mediated Tyr1472 phosphorylation may similarly regulate synaptic NMDA receptor clustering that is critical for rapid and efficient synaptic signaling.#
In summary, results of our studies raise the possibility that Fyn-dependent phosphorylation of Tyr1472-NR2B may constitute a key mechanism underlying BDNF synaptic plasticity. This is the first demonstration that BDNF signaling may be regulated at a single amino acid level.#
Experimental procedures
Materials and animals
Materials
BDNF was obtained from Peprotech (Princeton, NJ). K252a, LY294002, PD98059, U0126, PP2 and PP3 were purchased from Calbiochem (San Diego, CA). Wortmannin was a product of Sigma-Aldrich (St. Louis, MO). Active Fyn was obtained from Upstate Biotechnology (Lake Placid, NY).#
Antibodies
Rabbit polyclonal antibodies against NR2B were purchased from Chemicon (Temecula, CA). The anti-NR2B antibodies did not cross-react with rat NR2A subunits. Specific rabbit polyclonal antibodies against phospho-Tyr1472 of NR2B were raised using a synthetic peptide with the sequence CSNGHV(phospho-Y)EKLSSI as immunogen and purified from sera of the immunized rabbits by successive affinity chromatography (Nakazawa et al., 2001). Rabbit polyclonal antibodies against Fyn were from Santa Cruz Biotechnology (Santa Cruz, CA). Mouse anti-phosphotyrosine antibodies (PY20) were obtained from BD Transduction Laboratories (Rockville, MD). Horseradish peroxidase-conjugated (HRP) anti-rabbit IgG and anti-mouse IgG were both bought from Amersham Biosciences (Piscataway, NJ).#
Animals
Adult Sprague–Dawley rats were used. Colonies of wild-type and Fyn homozygous knockout mice were obtained from Jackson Laboratory (Bar Harbor, ME).#
Preparation of PSDs
Animals were sacrificed by exposure to CO2 vapor. Cerebral cortex was removed within 3 min and stored at −80 °C until use for isolation of PSDs as described (Wu and Siekevitz, 1988). All procedures were performed at 4 °C, unless otherwise stated. Briefly, brain tissues were weighed and soaked in 5 volumes (wt/vol) of solution A (320 mM sucrose, 0.5 mM CaCl2, 1 mM MgCl2, 1 mM NaHCO3) and homogenized (8 strokes at 800 rpm) with a motor-operated Teflon-glass homogenizer. The homogenate was centrifuged at 1475×g. The pellet was resuspended in solution A and centrifuged again at 710×g. The supernatant from two centrifugation steps was pooled and pelleted by high-speed centrifugation at 13,800×g. The pellet, containing crude synaptosomes, was resuspended in solution B (320 mM sucrose, 1 mM NaHCO3) and fractionated by discontinuous sucrose density gradient (1.0 M and 1.325 M sucrose solution) ultracentrifugation at 82,500×g for 1 h. The band that sedimented between 1.0 M and 1.325 M sucrose contained synaptosomes. The synaptosomal fraction was diluted in solution B to a final concentration of 4 mg/ml and then mixed with an equal volume of 1% (vol/vol) Triton X-100. The insoluble fraction was collected by centrifugation at 32,800×g for 20 min and then subjected to a discontinuous sucrose density gradient centrifugation (1.5 M and 2.0 M sucrose solution) at 23,800×g for 2 h. The resulting bands between 1.5 M and 2.0 M sucrose solution were collected and mixed with an equal volume of 1% Triton X-100/0.15 M KCl followed by centrifugation. The pellet was washed 3 times with 6 mM Tris–HCl (pH 8.1). The final PSD proteins were resuspended in 6 mM Tris–HCl (pH 8.1) with 10% (vol/vol) glycerol and stored at −80 °C until use. The PSDs thus prepared resemble those seen in situ, are homogeneous and free of membranes (Wu and Siekevitz, 1988).#
Protein concentration measurement
Protein concentration was determined using the BCA protein assay kit (Pierce, Rockford, IL) with bovine serum albumin as a standard.#
Cell culture
Low density cultures of dissociated embryonic day 16 mouse hippocampi were prepared according to the procedures of Levine et al. (1998). Time-mated pregnant mice were sacrificed by exposure to CO2 vapor. Fetal hippocampi were dissected, and meninges were removed. Pooled tissue from each litter was triturated through fire-polished Pasteur pipettes in 2 ml of Eagle's minimum essential medium (MEM) with added glucose and 7.5% FBS. Cells were plated on poly-d-lysine-coated culture dishes at a final density of 350,000 cells/35 mm dish. Cultures were maintained in serum-free medium (SFM) at 37 °C in a 95% air/5% CO2 humidified incubator for 10–14 days. SFM consisted of a 1:1 (vol/vol) mixture of Ham's F-12 and Eagle's minimum essential medium and supplemented with insulin (25 μg/ml), transferring (100 μg/ml), putrescine (60 μM), progesterone (20 nM), selenium (30 nM), glucose (6 mg/ml), penicillin (0.5 U/ml) and streptomycin (0.5 mg/ml). These cultures contained virtually pure neurons, as judged by neuron-specific enolase immunocytochemistry.#
BDNF-mediated Tyr1472-NR2B phosphorylation assays in PSDs
PSDs (80 μg protein in a final volume of 100 μl) were suspended in a HEPES buffer consisting of 50 mM HEPES (pH 7.5), 0.2 mM EGTA, 2 mM CaCl2, 10 μg/ml leupeptin, 10 μg/ml aprotinin, 20 μg/ml soybean trypsin inhibitor and 1 mM PMSF. Vehicle or BDNF (2, 5, 10, 25 ng/ml) was added to each experimental group. In parallel, NGF (2 ng/ml) and NT-3 (2 ng/ml) were used to determine the specificity of the neurotrophin response. The reaction mixtures were incubated for 10 min in the presence of 20 μM ATP at 37 °C to define dose response relationships. To examine the time course of BDNF effects, BDNF (2 ng/ml) was incubated for 5, 10 or 30 min. In other experiments, PSDs were preincubated in the presence or absence of pharmacological inhibitors for 20 min and then incubated with vehicle or 2 ng/ml BDNF for 10 min. The reactions were stopped by adding a sample buffer (62.5 mM Tris–HCl, pH 6.8, 2% SDS, 5% β-mercaptoethanol, 10% glycerol and 0.002% bromophenol blue) and then subjected to SDS-PAGE for Western blot analyses.#
SDS-PAGE and Western blot analysis
All procedures were as described previously (Suen et al., 1997) and performed at room temperature unless otherwise stated. Samples containing equal amounts of protein were denatured in the sample buffer at 90 °C for 5 min and subjected to vertical slab 7–11.5% gradient SDS-polyacrylamide gel electrophoresis (SDS-PAGE). Electrophoresis was carried out at 70 V for 16 h. Proteins were electrophoretically transferred to Immobilon-P membrane (Millipore, Bedford, MA) at 200 mA for 1 h. The transfer buffer consisted of 2 mM Tris–HCl, 39 mM glycine, 0.0375% SDS and 20% (vol/vol) methanol. The resultant membrane was blocked with 5% fat-free milk in 0.1% TBS-T (20 mM Tris–HCl, pH 7.4, 0.1% Tween 20) for 1 h and then incubated for another 1 h with primary antibodies, anti-NR2B or anti-Fyn antibodies (1 μg/ml) followed by incubation with secondary antibodies, anti-rabbit IgG (1:5000), for 45 min. Immunopositive bands were visualized by chemiluminescence using the ESL detection kit (NEN, Boston, MA). To detect levels of phosphorylation, the same membrane was stripped in a buffer consisting of 62.5 mM Tris–HCl, pH 6.8, 2% SDS and 100 mM β-mercaptoethanol. Antibodies against phospho-Tyr1472-NR2B or PY20 (1 μg/ml) were then used as primary antibodies.#
It should be noted that, on the same membrane, we first examined the phosphorylation level using the Tyr1472 antibodies and then examined the protein level using NR2B antibodies after stripping off the former antibodies. This method has been employed by many investigators and has been accepted in our previous publications (Suen et al. 1997; Lin et al. 1998; Wu et al. 2004). Indeed, after stripping, the proteins in the membranes were incubated with buffer allowing returning proteins to the original, active state. We found that stripping did not alter the extent of subsequent antibody probing. Of note, our previous studies, using the method, revealed that BDNF enhanced tyrosine phosphorylation of NR2B 1.7-fold, mimicking the effects of hippocampal LTP (Rosenblum et al. 1996; Rostas et al. 1996), suggesting that the stripping did not affect the subsequent antibody binding. Moreover, we found similar results using anti-phospho-Tyr1472-NR2B before anti-NR2B, indicating that the order of application of antibodies was not significant.#
BDNF-mediated Fyn phosphorylation assays
To examine the effects of BDNF on Fyn phosphorylation, PSDs (200 μg protein in a final volume of 100 μl) were suspended in the HEPES buffer and preincubated in the presence or absence of PP2 (1 μM) for 20 min at 37 °C. Vehicle or BDNF (2 ng/ml) was then added and incubated for addition 10 min in the presence of 20 μM ATP. The reactions were stopped by putting on ice and then subjected to immunoprecipitation.#
Immunoprecipitation
After the reaction with BDNF, the mixture was first centrifuged at 6700×g at 4 °C for 5 min. The pellets were dissolved in 100 μl of 1% SDS followed by addition of 9 volumes of lysis buffer (50 mM Tris–HCl, pH 7.5, 150 mM NaCl, 10 mM EDTA, 2 mM EGTA, 1% Triton X-100, 1% CHAPS, 0.5% Nonidet P-40, 10 μg/ml leupeptin, 10 μg/ml aprotinin, 20 μg/ml soybean trypsin inhibitor, 50 mM NaF, 1 mM PMSF, 1 mM o-vanadate and 0.5 mM microcystin-LR). The mixtures were shaken at 4 °C for 1 h. Then, the insoluble material was removed by centrifugation at 14,000×g for 5 min. Anti-Fyn antibodies (4 μg each) were added to the supernatant and incubated overnight at 4 °C. Subsequently, 50 μl of Protein-A–Sepharose CL-4B (Amersham Biosciences) was added and mixed for 2 h at 4 °C. The Sepharose–antigen–antibody complexes were pelleted by centrifugation at 14,000×g for 5 s and washed 3 times (20 min each) with a washing buffer (50 mM Tris–HCl, pH 8.1, 150 mM NaCl, 1% Triton X-100, 0.5% Nonidet P-40, 0.1% SDS and 1 mM PMSF). The immunoprecipitates were resuspended in 40 μl of sample buffer and subjected to SDS-PAGE for Western analysis to determine levels of Fyn protein and its tyrosine phosphorylation as described above.#
Quantitation
The intensity of bands was quantitated on a Bio-Rad (Hercules, CA) Gel Doc. Phosphorylation level per unit protein was obtained by dividing arbitrary densitometric units in immunoblot of phosphorylation over those in immunoblot of protein. Phosphorylation level per unit protein in the vehicle control was assigned a value of 100%. All experiments were performed 3 times for statistical analysis by Student's t-test. All results are mean±standard error of the mean (SEM). Representative Western blots are shown in figures.#
BDNF-mediated Tyr1472-NR2B phosphorylation assays in hippocampal neurons
To study the effect of BDNF on Tyr1472 phosphorylation in hippocampal neurons, 6 dishes of cultured neurons (350,000 cells per dish) were treated with or without 20 ng/ml BDNF at 37 °C for 10 min. Neurons were washed with PBS twice and each dish was solubilized in 100 μl of a lysis buffer (50 mM Tris–HCl, pH 7.5, containing 0.5% SDS, 150 mM NaCl, 10 mM EDTA, 2 mM EGTA, 1% Triton X-100, 1% CHAPS, 0.5% Nonidet P-40, 10 μg/ml leupeptin, 10 μg/ml aprotinin, 20 μg/ml soybean trypsin inhibitor, 50 mM NaF, 1 mM PMSF, 1 mM o-vanadate and 0.5 mM microcystin-LR). The lysates were then scrapped off and processed to immunoprecipitation using anti-NR2B antibodies (4 μg per tube). The immunoprecipitates were subjected to electrophoresis followed by Western analysis for levels of NR2B protein and its Tyr1472 phosphorylation.#
Electrophysiological methods
Recordings
Cell-attached single-channel recordings of NMDA receptor channel activity were made from dissociated hippocampal neurons after 10–14 days in vitro. Currents were recorded with an Axoclamp 200 amplifier (Axon Instruments, Union City, CA) and digitalized with an INDEC interface (INDEC Biosystems, Mountain View, CA). Recorded cells had large, pyramidal-shaped cell bodies and two or three major processes. Cells were bathed in an isotonic potassium solution (140 mM potassium gluconate, 10 mM HEPES, 5 mM EGTA) to set the intracellular membrane potential to ∼0 mV. NMDA (10 μM; Sigma-Aldrich) and glycine (3 μM; Sigma-Aldrich) were added to a standard pipette solution (10 mM Cs-methanesulfonate, 110 mM Na2SO4, 25 mM HEPES, 33 mM glucose, 1.3 mM CaCl2). The typical range of pipette resistance was 3–5 MΩ. Signals were digitized at 5 kHz and filtered at 1 kHz. The intersweep interval was 1 s. Patches typically contained 1–3 channels as judged by the number of overlapping openings. NMDA receptor activity was isolated by using the Mg2+-free pipette solution that allowed us to use a holding potential (−80 mV) well below the thresholds of voltage-gated K+, Na+ and Ca2+ channels. NMDA receptor identity was confirmed by conductance and reversal potential measurements that were identical to those reported by other laboratories. BDNF (20 ng/ml) or vehicle was applied with a perfusion system (Ogata and Tatebayashi, 1991). All recordings were performed at room temperature. Each recording used a single cell from a separate dish, and at least 4 different platings were used for each condition.#
Data analysis
Programs for data acquisition and analysis were written in-house. Data were analyzed by integrating the channel current for each sweep during the baseline and test periods and converting these values to charge. These charge measurements for all sweeps were then averaged into 1-minute time bins. Baseline is considered the average channel charge during the 4 min period (−4 to 0 min) in bath solution immediately before BDNF application. Fold increases were then determined by dividing the channel charge during BDNF exposure by the baseline. To compare changes in the magnitude of the BDNF effect under various conditions, a response is defined as one or more time bins increasing at least two standard errors over baseline. Recordings were rejected if any binned time period after switching to BDNF exposure was 2× SEM below baseline, indicating “run down”.#
Acknowledgments
We thank Ms. Betty Wheeler for excellent technical assistance. This work was supported by grants from the National Institute of Child Health and Human Development (I.B.B.) and the National Institute of Neurological Disorders and Stroke (M.R.P.).#
Figures and Tables
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